PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 904766
Common NameARALYDRAFT_904766
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family ERF
Protein Properties Length: 340aa    MW: 37138.6 Da    PI: 4.68
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
904766genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.73.9e-15128176153
     AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
             s+  GVr++k +g+W+AeIr+p     + +r +lg++ t e+Aa a+ a ++++
  904766 128 SKPVGVRQRK-WGKWAAEIRHPI----TkTRTWLGTYETLEQAANAYAAKKLEF 176
             7899*****9.**********72....36******************9988775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.45E-19128174No hitNo description
PfamPF008471.1E-9128176IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-14129176IPR016177DNA-binding domain
SMARTSM003805.2E-13129183IPR001471AP2/ERF domain
PROSITE profilePS5103218.215129186IPR001471AP2/ERF domain
PRINTSPR003671.7E-6130141IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-19132178IPR001471AP2/ERF domain
PRINTSPR003671.7E-6152168IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MAERKKRSSI QTNKPHKKPM KKKTFQLNHL PGLSEDLKTM RKLRFVVNDP YATDYSSSEE  60
DERVQRRKRY VCEIDLPFAQ GATQAESESS VCQESSNNGG SKSKISACSK KVFSSKVSPV  120
VGRSSSVSKP VGVRQRKWGK WAAEIRHPIT KTRTWLGTYE TLEQAANAYA AKKLEFDALA  180
AATSAASSVL SDSNESGSMI SASGSNVEAV SSIDLDKMLV DSTLDPQAGE SKKATFDFDF  240
ADLQIPDLGC FIDESLIPNA CELDFLLTEE NNNQMLDDYC GIDDLDIIGL ECDGPSELPD  300
YDFSDVEIDL GLIGTTIEKY AFVDHIATAA TTPLNIACP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002875289.10.0hypothetical protein ARALYDRAFT_904766
SwissprotQ9LUA20.0EF119_ARATH; Ethylene-responsive transcription factor ERF119
TrEMBLD7LQW30.0D7LQW3_ARALL; Putative uncharacterized protein
STRINGscaffold_500470.10.0(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM25372671
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25890.21e-163ERF family protein